JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1534.1 NR1I3 Homo sapiens Nuclear Thyroid
MA1535.1 NR2C1 Homo sapiens Nuclear RXR-related
MA1536.1 NR2C2 Homo sapiens Nuclear RXR-related
MA1537.1 NR2F1 Homo sapiens Nuclear RXR-related
MA1538.1 NR2F1 Homo sapiens Nuclear RXR-related
MA1539.1 NR2F6 Homo sapiens Nuclear RXR-related
MA1540.1 NR5A1 Homo sapiens Nuclear FTZF1related(NR5A)
MA1540.2 NR5A1 Mus musculus Nuclear FTZF1related(NR5A)
MA1541.1 NR6A1 Homo sapiens Nuclear GCNF-related
MA1542.1 OSR1 Homo sapiens C2H2 Other
Showing 10 profiles of page 193 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.