JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1563.2 SOX18 Homo sapiens High-mobility SOX-related
MA1564.1 SP9 Homo sapiens C2H2 Three-zinc
MA1565.1 TBX18 Homo sapiens T-Box TBX1-related
MA1566.1 TBX3 Homo sapiens T-Box TBX2-related
MA1566.2 TBX3 Homo sapiens T-Box TBX2-related
MA1567.1 TBX6 Homo sapiens T-Box TBX6-related
MA1567.2 Tbx6 Mus musculus T-Box TBX6-related
MA1568.1 TCF21 Homo sapiens Basic Tal-related
MA1569.1 TFAP2E Homo sapiens Basic AP-2
MA1570.1 TFAP4 Homo sapiens Basic bHLH-ZIP
Showing 10 profiles of page 196 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.