JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1801.1 TREE1 Arabidopsis thaliana C2H2
MA1802.1 TRP5 Arabidopsis thaliana Tryptophan Myb-related
MA1803.1 VIP1 Arabidopsis thaliana Basic Group
MA1804.1 WIN1 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1805.1 WRKY53 Arabidopsis thaliana GCM WRKY
MA1807.1 ZHD10 Arabidopsis thaliana Homeo PLINC
MA1808.1 GLYMA-06G314400 Glycine max Basic Group
MA1809.1 GLYMA-07G038400 Glycine max CH3 GRF
MA1810.1 GLYMA-08G357600 Glycine max B3 ABI3
MA1811.1 GLYMA-13G317000 Glycine max Basic Group
Showing 10 profiles of page 219 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.