JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0352.1 PDR1 Saccharomyces cerevisiae C6
MA0352.2 PDR1 Saccharomyces cerevisiae C6
MA0353.1 PDR3 Saccharomyces cerevisiae C6
MA0354.1 PDR8 Saccharomyces cerevisiae C6
MA0355.1 PHD1 Saccharomyces cerevisiae APSES-type
MA0356.1 PHO2 Saccharomyces cerevisiae Homeo
MA0357.1 PHO4 Saccharomyces cerevisiae Basic
MA0358.1 PUT3 Saccharomyces cerevisiae C6
MA0359.1 RAP1 Saccharomyces cerevisiae Tryptophan Myb/SANT
MA0359.2 RAP1 Saccharomyces cerevisiae Tryptophan Myb/SANT
Showing 10 profiles of page 52 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.